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Research Associate in Computational Hyperspectral Imaging

Employer
KINGS COLLEGE LONDON
Location
London (Greater)
Salary
Grade 6, £38,826 - £45,649 per annum, including London Weighting Allowance
Closing date
23 Feb 2022

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Job Details

Job description
We are seeking an interventional image computing researcher to design and translate the next generation of  AI-assisted hyperspectral imaging systems for surgical guidance using quantitative fluorescence. The postholder, based within the Department of Surgical & Interventional Engineering at King’s College London, will play a key role in a collaborative project with King’s College Hospital and work closely with the project’s industrial collaborator Hypervision Surgical, a recently founded King’s spin-out company. A clinical neurosurgery study has been set up to underpin this collaboration. The successful candidate will work on the resulting neurosurgical data as well as controlled phantom data. They will also have the opportunity to provide insight on how to best acquire prospective data. 
 
Brain tumour surgery involves removing as much of the tumour as safely as possible. However, even with the best hands and the most modern technology currently available, it is often not possible to reliably identify tumour during surgery. Hyperspectral imaging (HSI) has the potential to enhance the surgeon’s vision to reliably identify tumour and healthy brain structures through the use of quantitative fluorescence. HSI data is nonetheless complex, high-dimensional and thus requires advanced computer-processing before it can be visualised and interpreted by the surgical team. 
 
Key activities relate to the processing of hyperspectral imaging, from low-level image reconstruction to deep-learning based tissue property estimation and semantic segmentation of brain and tumour tissue. The recruited individual will complement our multidisciplinary team and undertake research on image computing, machine learning, and artificial intelligence for computer-assisted interventions. 
 
The post involves close and active collaboration with researchers, engineers, and clinicians. Working with established platforms and building on the software already present within our teams is of paramount importance to ensure project cohesion and strong links with the members of the team. The close collaboration between King’s College London, King’s College Hospital and Hypervision Surgical Ltd will ensure a fast-tracked conversion from the research development into products achieving accelerated patient and public benefit. 
 
The successful candidate will design, develop, and translate modular software components for hyperspectral image computing, machine learning and visualisation. They will also interface those with existing software and hardware components including the operative surgical microscope. Specifically, the candidate will develop algorithms for quantitative fluorescence estimation, super-resolution, tissue differentiation and informative visualisation. The candidate will work closely with the rest of the team to correlate the result of their work with rich clinical data (e.g. surgical microscopy, histopathology) and validate the overall imaging system. 
 
This post will be offered on an a fixed-term contract for 3 years  
This can be a full-time or part-time post – 50-100% full time equivalent

Key responsibilities

  • Develop, validate and integrate algorithms for interventional hyperspectral imaging for intraoperative quantitative fluorescence  
  • Contribute to project management tasks 
  • Maintain accurate and up-to date technical and user documentation of the delivered software 
  • Contribute to the dissemination of the research through publications, open-source software and public engagement activities 

The above list of responsibilities may not be exhaustive, and the post holder will be required to undertake such tasks and responsibilities as may reasonably be expected within the scope and grading of the post.  
 

Skills, knowledge, and experience 
 
Essential criteria 

 
1.       Honours degree (2:1 or above) or equivalent in Mathematics, Engineering, Physics, Computer Science or related numerate discipline 
2.       PhD or equivalent industry experience in Computer Assisted Intervention or a closely related field 
3.       Good knowledge of machine learning and computer vision algorithms 
4.       Solid knowledge of and experience using the Python and C++ programming languages 
5.       Experience with scientific software packages such as PyTorch, Pandas, SciPy, NumPy, SciKit's, OpenCV, etc. 
6.       Experience in standard software engineering practices including version control systems and software testing methodologies 
7.       Experience working on system integration tasks and ability to work with a variety of people from different disciplines 
 
Desirable criteria 
 
1.       A demonstrable record of publications in peer-reviewed conference proceedings and scientific journals 
2.       Experience in real-time computing optimization (Parallel computing, GPGPU programming, deep learning inference engines such as TensorRT, etc.)  
3.       Understanding of image acquisition and hardware components relevant to real-time data acquisition and processing of computational biophotonics. 
 
* Please note that this is a PhD level role but candidates who have submitted their thesis and are awaiting award of their PhDs will be considered. In these circumstances the appointment will be made at Grade 5, spine point 30 with the title of Research Assistant. Upon confirmation of the award of the PhD, the job title will become Research Associate and the salary will increase to Grade 6.

Company

King's College London is one of the top 20 universities in the world and among the oldest in England. King's has more than 27,600 students (of whom nearly 10,500 are graduate students) from some 150 countries worldwide, and some 6,800 staff.

King's has an outstanding reputation for world-class teaching and cutting-edge research. In the 2014 Research Excellence Framework (REF) King’s was ranked 6th nationally in the ‘power’ ranking, which takes into account both the quality and quantity of research activity, and 7th for quality according to Times Higher Education rankings. Eighty-four per cent of research at King’s was deemed ‘world-leading’ or ‘internationally excellent’ (3* and 4*). The university is in the top seven UK universities for research earnings and has an overall annual income of more than £684 million.

King's has a particularly distinguished reputation in the humanities, law, the sciences (including a wide range of health areas such as psychiatry, medicine, nursing and dentistry) and social sciences including international affairs. It has played a major role in many of the advances that have shaped modern life, such as the discovery of the structure of DNA and research that led to the development of radio, television, mobile phones and radar.

King's College London and Guy's and St Thomas', King's College Hospital and South London and Maudsley NHS Foundation Trusts are part of King's Health Partners. King's Health Partners Academic Health Sciences Centre (AHSC) is a pioneering global collaboration between one of the world's leading research-led universities and three of London's most successful NHS Foundation Trusts, including leading teaching hospitals and comprehensive mental health services. For more information, visit: www.kingshealthpartners.org.

King’s £600 million campaign, World questions|KING’s answers, has delivered huge global impact in areas where King’s has particular expertise. Philanthropic support has funded new research to save young lives at Evelina London Children’s Hospital; established the King’s Dickson Poon School of Law as a worldwide leader in transnational law; built a new Cancer Centre at Guy’s Hospital; allowed unique collaboration between leading neuroscientists to fast-track new treatments for Alzheimer’s, Parkinson’s, motor neurone disease, depression and schizophrenia at the new Maurice Wohl Clinical Neuroscience Institute; created the Cicely Saunders Institute: the first academic institution in the world dedicated to palliative care, and supported the King’s Sierra Leone Partnership in the Ebola crisis. Donations provide over 300 of the most promising students with scholarships and bursaries each year. More information about the campaign is available at www.kcl.ac.uk/kingsanswers.

Company info
Mini-site
KINGS COLLEGE LONDON
Telephone
+(44)02078365454
Location
STRAND
LONDON
WC2R 2LS
United Kingdom

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