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Research Associate or Research Fellow in Federated Learning for Healthcare

Employer
KINGS COLLEGE LONDON
Location
London (Greater)
Salary
£38,304 - £54,534 Per Annum, Including London Weighting Allowance
Closing date
23 Aug 2020

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Academic Discipline
Biological Sciences, Life sciences
Job Type
Research Related, Research Associate
Contract Type
Fixed Term
Hours
Full Time

Job Details

Medicine is undergoing a data revolution, with AI being the engine of change. To unlock this potential, AI algorithms need to learn from very large datasets scattered across multiple hospitals and multiple countries, all in a privacy-preserving and transparent manner. New approaches to algorithmic learning based on recently developed concepts of Federated Learning and Differential Privacy provide the mathematical framework to enable this vision. This research programme will develop a new set of algorithms and associated software platforms to enable federated learning at scale, respectful of the hospital IT infrastructure, with privacy guarantees, and with full traceability of actions, thus ensuring the trust of our patients. Such a platform would enable unprecedented access to data at scale, necessary to solve many pressing healthcare problems.

The environment:

The London Medical Imaging & AI Centre for Value-Based Healthcare is a consortium of academic, NHS and industry partners led by King's and based at St Thomas' Hospital. Our diverse research teams are training sophisticated artificial intelligence algorithms from a vast wealth of NHS medical images and patient pathway data to create new healthcare tools. For patients, these will provide faster diagnosis, personalised therapies and effective screening across a range of conditions and procedures. Through a focus on our experience in value-based healthcare we are examining how AI can be used to optimise triage and target resources to deliver significant financial savings for the NHS and healthcare systems overall. The centre has been established as part of the UK Government's Industrial Strategy Challenge Fund, delivered through UK Research and Innovation.

The purpose of this role:

This is an exciting opportunity for an enthusiastic privacy-minded deep learning researcher to push the boundaries of Federated Learning and Differential Privacy applied to healthcare data.

This role will build of the AI4VBHC centre to deliver on two major deep learning research challenges, namely Data Governance, and Patient Privacy. More specifically, this post will develop new algorithms and associated software stack to enable Federated Learning at scale, in a way that is respectful of the hospital IT infrastructure and constraints. Furthermore, the post holder will also develop AI algorithmic privacy guarantees under the framework of Differential Privacy to ensure that any user would be able to utilise the federated learning network and the distributed raw patient data without endangering patient privacy. These algorithms shall be integrated and deployed into the AI4VBHC centre infrastructure as a proof-of-concept, demonstrating that federated and privacy preserving learning can safely learn from patient data scattered across multiple hospitals, depicted in the figure below.

This is a full time fixed-term contract for two years. 

Key responsibilities

The successful applicant will be responsible for developing federated learning models for imaging and non-imaging data across multiple hospitals, optimising the federated compute plan to the realities of hospital IT constraints, and develop differential privacy approaches that preserve subject privacy. Models and algorithms shall build on the MONAI (monai.io) and Pytorch for the machine learning stack, and on Substra (substra.ai) for the deep learning stack, continuing the AI centre's open source tradition. The applicant shall also engage and further develop research relationships with key AI-centre-related hospital partners (e.g. KCH, GSTT, and UCLH), and major industrial partners (e.g. NVIDIA, and OWKIN).

The applicant should ideally have some knowledge and experience of:

  1. Medical image analysis
  2. Deep Learning
  3. Data science
  4. Statistical modelling

The position would appeal to a candidate with strong software development skills, including:

  1. Classic machine learning and deep learning packages (e.g. pytorch,…)
  2. Data science and statistical modelling packages (Pandas, SciPy/Statsmodels)
  3. Container orchestration tools (Kubernetes, Docker)

An interest in federated learning and differential privacy applications is important, but previous experience is not essential. Previous experience with large-scale computing services would be useful but not essential. Strong communication skills are required to work with researchers from other disciplines, such as clinical end-users, and industry collaborators.

The candidate is also expected to:

  • work in close collaboration with KCH, GSTT, and UCLH colleagues
  • work in close collaboration with our key industrial partners, NVIDIA and OWKIN
  • work towards a common software stack

Experience working with interdisciplinary teams of engineers and clinicians will be valued. A strongly independent applicant is required who will need to work well with inter-disciplinary teams.

The above list of responsibilities may not be exhaustive, and the post holder will be required to undertake such tasks and responsibilities as may reasonably be expected within the scope and grading of the post.

Company

King's College London is one of the top 20 universities in the world and among the oldest in England. King's has more than 27,600 students (of whom nearly 10,500 are graduate students) from some 150 countries worldwide, and some 6,800 staff.

King's has an outstanding reputation for world-class teaching and cutting-edge research. In the 2014 Research Excellence Framework (REF) King’s was ranked 6th nationally in the ‘power’ ranking, which takes into account both the quality and quantity of research activity, and 7th for quality according to Times Higher Education rankings. Eighty-four per cent of research at King’s was deemed ‘world-leading’ or ‘internationally excellent’ (3* and 4*). The university is in the top seven UK universities for research earnings and has an overall annual income of more than £684 million.

King's has a particularly distinguished reputation in the humanities, law, the sciences (including a wide range of health areas such as psychiatry, medicine, nursing and dentistry) and social sciences including international affairs. It has played a major role in many of the advances that have shaped modern life, such as the discovery of the structure of DNA and research that led to the development of radio, television, mobile phones and radar.

King's College London and Guy's and St Thomas', King's College Hospital and South London and Maudsley NHS Foundation Trusts are part of King's Health Partners. King's Health Partners Academic Health Sciences Centre (AHSC) is a pioneering global collaboration between one of the world's leading research-led universities and three of London's most successful NHS Foundation Trusts, including leading teaching hospitals and comprehensive mental health services. For more information, visit: www.kingshealthpartners.org.

King’s £600 million campaign, World questions|KING’s answers, has delivered huge global impact in areas where King’s has particular expertise. Philanthropic support has funded new research to save young lives at Evelina London Children’s Hospital; established the King’s Dickson Poon School of Law as a worldwide leader in transnational law; built a new Cancer Centre at Guy’s Hospital; allowed unique collaboration between leading neuroscientists to fast-track new treatments for Alzheimer’s, Parkinson’s, motor neurone disease, depression and schizophrenia at the new Maurice Wohl Clinical Neuroscience Institute; created the Cicely Saunders Institute: the first academic institution in the world dedicated to palliative care, and supported the King’s Sierra Leone Partnership in the Ebola crisis. Donations provide over 300 of the most promising students with scholarships and bursaries each year. More information about the campaign is available at www.kcl.ac.uk/kingsanswers.

Company info
Mini-site
KINGS COLLEGE LONDON
Telephone
+(44)02078365454
Location
STRAND
LONDON
WC2R 2LS
United Kingdom

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